ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P77334_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P77334_F1_nD3

P77334_F1_nD3

UID: 004007962

AlphaFold

Range: 236-405
AlphaFold: AF-P77334
UniProt: P77334 (all domains)
Gene: pdeR

Protein: Cyclic di-GMP phosphodiesterase PdeR (EC 3.1.4.52)

3D Structure

Loading viewer...

Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

AlphaFold DB: P77334 UniProt: P77334

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-405