ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P39347_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P39347_F1_nD2

P39347_F1_nD2

UID: 004008052

AlphaFold

Range: 71-175
AlphaFold: AF-P39347
UniProt: P39347 (all domains)
Gene: intB

Protein: Putative protein IntB (Int(P4)) (Putative prophage P4 integrase)

3D Structure

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Related Domains

Browse other domains in Phage_int_M →

Classification

AArchitecturealpha arrays(a.6)

XX-grouplambda integrase-N-like(186)

HH-grouplambda integrase-N(186.1)

TT-grouplambda integrase-N(186.1.1)

FFamilyPhage_int_M(186.1.1.8)

Pfam Families

PF22022Phage_int_M

Phage integrase central domain

ClanCL0469l-integrase_N

External Links

AlphaFold DB: P39347 UniProt: P39347

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-175