ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0AB38_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0AB38_F1_nD1

P0AB38_F1_nD1

UID: 004009112

AlphaFold

Range: 76-210
AlphaFold: AF-P0AB38
UniProt: P0AB38 (all domains)
Gene: lpoB

Protein: Penicillin-binding protein activator LpoB (PBP activator LpoB) (Lipoprotein activator of PBP from the outer membrane B)

3D Structure

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Related Domains

Browse other domains in LpoB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLpoB(7503.1.1.7)

Pfam Families

Peptidoglycan-synthase activator LpoB

ClanCL0342TolB_N

External Links

AlphaFold DB: P0AB38 UniProt: P0AB38

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-210