ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P76104_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P76104_F1_nD1

P76104_F1_nD1

UID: 004009449

AlphaFold

Range: 6-315,396-405,521-630
AlphaFold: AF-P76104
UniProt: P76104 (all domains)
Gene: rlhA

Protein: 23S rRNA 5-hydroxycytidine C2501 synthase (Large subunit ribosomal RNA hydroxylation A)

3D Structure

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Related Domains

Browse other domains in Peptidase_U32 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPeptidase_U32(2002.1.1.52)

Pfam Families

PF01136Peptidase_U32

Peptidase family U32

External Links

AlphaFold DB: P76104 UniProt: P76104

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-315,396-405,521-630