ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P52647_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/P52647_F1_nD6

P52647_F1_nD6

UID: 004009712

AlphaFold

Range: 791-895,951-1165
AlphaFold: AF-P52647
UniProt: P52647 (all domains)
Gene: ydbK

Protein: Probable pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_C(7574.1.1.5)

Pfam Families

PF02775TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

AlphaFold DB: P52647 UniProt: P52647

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 791-895,951-1165