ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P39347_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P39347_F1_nD1

P39347_F1_nD1

UID: 004009814

AlphaFold

Range: 1-65
AlphaFold: AF-P39347
UniProt: P39347 (all domains)
Gene: intB

Protein: Putative protein IntB (Int(P4)) (Putative prophage P4 integrase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Arm-DNA-bind_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupGCC-box binding domain-like(252.2)

TT-groupGCC-box binding domain-like(252.2.1)

FFamilyArm-DNA-bind_3(252.2.1.5)

Pfam Families

PF13356Arm-DNA-bind_3

Arm DNA-binding domain

ClanCL0081MBD-like

External Links

AlphaFold DB: P39347 UniProt: P39347

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-65