ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P38036_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P38036_F1_nD2

P38036_F1_nD2

UID: 004010068

RepresentativeAlphaFold

Range: 276-790
AlphaFold: AF-P38036
UniProt: P38036 (all domains)
Gene: ygcB

Protein: CRISPR-associated endonuclease/helicase Cas3 (EC 3.1.-.-) (EC 3.6.4.-)

3D Structure

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Related Domains

Browse other domains in DEAD, Cas3-like_C_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD, Cas3-like_C_2(2004.1.1.796)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

PF22590Cas3-like_C_2

CRISPR-associated nuclease/helicase Cas3, C-terminal

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: P38036 UniProt: P38036

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 276-790