ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A175VZI1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A175VZI1_F1_nD1

A0A175VZI1_F1_nD1

UID: 004011995

AlphaFold

Range: 6-159
AlphaFold: AF-A0A175VZI1
UniProt: A0A175VZI1 (all domains)
Gene: MMYC01_207728

Protein: tRNA-splicing endonuclease subunit tsp-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sen15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-grouptRNA-intron endonuclease catalytic domain-like(2008.2)

TT-grouptRNA-intron endonuclease catalytic domain-like(2008.2.1)

FFamilySen15(2008.2.1.2)

Pfam Families

Sen15 protein

ClanCL0236PDDEXK

External Links

AlphaFold DB: A0A175VZI1 UniProt: A0A175VZI1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-159