ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A175VNS3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A175VNS3_F1_nD1

A0A175VNS3_F1_nD1

UID: 004013631

AlphaFold

Range: 41-140,282-305
AlphaFold: AF-A0A175VNS3
UniProt: A0A175VNS3 (all domains)
Gene: MMYC01_210296

Protein: 20S-pre-rRNA D-site endonuclease NOB1

3D Structure

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Related Domains

Browse other domains in PIN_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN_6(2006.1.4.12)

Pfam Families

PIN domain of ribonuclease

ClanCL0280PIN

External Links

AlphaFold DB: A0A175VNS3 UniProt: A0A175VNS3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-140,282-305