ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k65B1 - ECOD Domain | ECOD

ECOD/Domains/e3k65B1

e3k65B1

UID: 000401542

PDB

Range: B:279-577
PDB: 3K65 chain B(all domains)
UniProt: P00734 (all domains)
Gene: F2

Molecule: Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]

3D Structure

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Related Domains

Browse other domains in Trypsin,Thrombin_light →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyTrypsin,Thrombin_light(1.1.5.2)

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

PF09396Thrombin_light

Thrombin light chain

External Links

ECOD PDB View: 3K65 RCSB PDB: 3K65 PDBe: 3K65 UniProt: P00734

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