ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A175WB40_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A175WB40_F1_nD5

A0A175WB40_F1_nD5

UID: 004017203

AlphaFold

Range: 891-1075
AlphaFold: AF-A0A175WB40
UniProt: A0A175WB40 (all domains)
Gene: MMYC01_204131

Protein: DNA-directed RNA polymerase subunit (EC 2.7.7.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-grouphelical domain in yeast RNA-polymerases(4957)

HH-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1)

TT-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1.1)

FFamilyRNA_pol_Rpb1_6(4957.1.1.1)

Pfam Families

PF04992RNA_pol_Rpb1_6

RNA polymerase Rpb1, domain 6

External Links

AlphaFold DB: A0A175WB40 UniProt: A0A175WB40

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 891-1075