ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A175WBU5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A175WBU5_F1_nD3

A0A175WBU5_F1_nD3

UID: 004017800

AlphaFold

Range: 1021-1060
AlphaFold: AF-A0A175WBU5
UniProt: A0A175WBU5 (all domains)
Gene: MMYC01_202126

Protein: Vacuolar morphogenesis protein 6

3D Structure

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Related Domains

Browse other domains in Vps39_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyVps39_2(377.1.1.20)

Pfam Families

PF10367zf-Vps39_C

Vacuolar sorting protein 39 C-terminal zinc finger domain

ClanCL0229RING

External Links

AlphaFold DB: A0A175WBU5 UniProt: A0A175WBU5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1021-1060