ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A175W1U1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A175W1U1_F1_nD2

A0A175W1U1_F1_nD2

UID: 004018807

AlphaFold

Range: 101-230
AlphaFold: AF-A0A175W1U1
UniProt: A0A175W1U1 (all domains)
Gene: MMYC01_208571

Protein: RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog (EC 3.1.3.16)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPAP2_Rtr1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRegulator of transcription protein Rtr1(3371)

HH-groupRegulator of transcription protein Rtr1(3371.1)

TT-groupRegulator of transcription protein Rtr1(3371.1.1)

FFamilyRPAP2_Rtr1(3371.1.1.1)

Pfam Families

PF04181RPAP2_Rtr1

Rtr1/RPAP2 family

External Links

AlphaFold DB: A0A175W1U1 UniProt: A0A175W1U1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-230