ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iimA1 - ECOD Domain | ECOD

ECOD/Domains/e3iimA1

e3iimA1

UID: 000401946

PDB

Range: A:1-172
PDB: 3IIM chain A(all domains)
UniProt: Q9Y3D8 (all domains)
Gene: AK6

Molecule: Coilin-interacting nuclear ATPase protein

3D Structure

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Related Domains

Browse other domains in AAA_18 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_18(2004.1.1.192)

Ligands

in contact, ≤ 4 Å

D-1,4-dithiothreitolDTV
drugDrugBank DB02184
2'-DEOXYADENOSINE-5'-DIPHOSPHATEDAT

+ 2 additives (HEPES, Sulfate ion)

HEPES

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3IIM RCSB PDB: 3IIM PDBe: 3IIM UniProt: Q9Y3D8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.