ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A175WFK4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A175WFK4_F1_nD1

A0A175WFK4_F1_nD1

UID: 004020328

AlphaFold

Range: 6-50
AlphaFold: AF-A0A175WFK4
UniProt: A0A175WFK4 (all domains)
Gene: MMYC01_201992

Protein: Pogo transposable element with ZNF domain

3D Structure

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Related Domains

Browse other domains in HTH_psq →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_psq(101.1.1.35)

Pfam Families

PF05225HTH_psq

helix-turn-helix, Psq domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A175WFK4 UniProt: A0A175WFK4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-50