ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A175W220_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A175W220_F1_nD1

A0A175W220_F1_nD1

UID: 004021761

AlphaFold

Range: 36-210,236-565,596-615
AlphaFold: AF-A0A175W220
UniProt: A0A175W220 (all domains)
Gene: MED16

Protein: Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16)

3D Structure

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Related Domains

Browse other domains in Med16_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyMed16_N(5.1.4.100)

Pfam Families

PF11635Med16_N

Mediator complex subunit 16, N-terminal

ClanCL0186Beta_propeller

External Links

AlphaFold DB: A0A175W220 UniProt: A0A175W220

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-210,236-565,596-615