ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A175WBU5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A175WBU5_F1_nD2

A0A175WBU5_F1_nD2

UID: 004022253

AlphaFold

Range: 381-470,551-585,611-885,921-1005
AlphaFold: AF-A0A175WBU5
UniProt: A0A175WBU5 (all domains)
Gene: MMYC01_202126

Protein: Vacuolar morphogenesis protein 6

3D Structure

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Related Domains

Browse other domains in Vps39_1, TPR_Vps41 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps39_1, TPR_Vps41(109.4.1.2196)

Pfam Families

PF10366Vps39_1

Vacuolar sorting protein 39 domain 1

ClanCL0020TPR

PF23556TPR_Vps41

Vps41 TPR-like region

ClanCL0020TPR

External Links

AlphaFold DB: A0A175WBU5 UniProt: A0A175WBU5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-470,551-585,611-885,921-1005