ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A175W5M5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A175W5M5_F1_nD4

A0A175W5M5_F1_nD4

UID: 004022269

AlphaFold

Range: 436-535
AlphaFold: AF-A0A175W5M5
UniProt: A0A175W5M5 (all domains)
Gene: MMYC01_204735

Protein: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

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Related Domains

Browse other domains in OB_RRP5_4th →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_RRP5_4th(2.1.1.233)

Pfam Families

PF24685OB_RRP5_4th

RRP5 OB-fold domain

ClanCL0021OB

External Links

AlphaFold DB: A0A175W5M5 UniProt: A0A175W5M5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 436-535