ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8IDJ8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8IDJ8_F1_nD2

Q8IDJ8_F1_nD2

UID: 004023741

AlphaFold

Range: 81-220
AlphaFold: AF-Q8IDJ8
UniProt: Q8IDJ8 (all domains)
Gene: PF3D7_1350100

Protein: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA_anti-codon →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_anti-codon(2.1.1.15)

Pfam Families

PF01336tRNA_anti-codon

OB-fold nucleic acid binding domain

ClanCL0021OB

External Links

AlphaFold DB: Q8IDJ8 UniProt: Q8IDJ8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-220