ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IDJ8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8IDJ8_F1_nD3

Q8IDJ8_F1_nD3

UID: 004023758

AlphaFold

Range: 221-580
AlphaFold: AF-Q8IDJ8
UniProt: Q8IDJ8 (all domains)
Gene: PF3D7_1350100

Protein: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

AlphaFold DB: Q8IDJ8 UniProt: Q8IDJ8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 221-580