ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A5K1K870_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A5K1K870_F1_nD2

A0A5K1K870_F1_nD2

UID: 004024701

AlphaFold

Range: 291-365
AlphaFold: AF-A0A5K1K870
UniProt: A0A5K1K870 (all domains)
Gene: PF3D7_0524400

Protein: Ribosome-interacting GTPase 1, putative

3D Structure

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Related Domains

Browse other domains in TGS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyTGS(221.1.1.16)

Pfam Families

TGS domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A5K1K870 UniProt: A0A5K1K870

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-365