ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8IDB5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8IDB5_F1_nD2

Q8IDB5_F1_nD2

UID: 004025680

AlphaFold

Range: 81-180
AlphaFold: AF-Q8IDB5
UniProt: Q8IDB5 (all domains)
Gene: PF3D7_1359200

Protein: High mobility group protein B4, putative

3D Structure

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Related Domains

Browse other domains in CBFD_NFYB_HMF →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupHistone(148.1.1)

FFamilyCBFD_NFYB_HMF(148.1.1.4)

Pfam Families

PF00808CBFD_NFYB_HMF

Histone-like transcription factor (CBF/NF-Y) and archaeal histone

ClanCL0012Histone

External Links

AlphaFold DB: Q8IDB5 UniProt: Q8IDB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-180