ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K1K8P1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K1K8P1_F1_nD1

A0A5K1K8P1_F1_nD1

UID: 004025967

AlphaFold

Range: 6-255
AlphaFold: AF-A0A5K1K8P1
UniProt: A0A5K1K8P1 (all domains)
Gene: PF3D7_1344500

Protein: U6 snRNA phosphodiesterase 1 (3'-5' RNA exonuclease USB1)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyHVSL(264.1.1.6)

Pfam Families

Uncharacterised conserved protein

ClanCL02472H

External Links

AlphaFold DB: A0A5K1K8P1 UniProt: A0A5K1K8P1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-255