ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IM49_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8IM49_F1_nD2

Q8IM49_F1_nD2

UID: 004026590

AlphaFold

Range: 6-65,126-465
UniProt: Q8IM49 (all domains)
Gene: PF3D7_1404500

Protein: rRNA biogenesis protein RRP5, putative

3D Structure

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Related Domains

Browse other domains in HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N(109.4.1.1731)

Pfam Families

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

External Links

UniProt: Q8IM49

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