ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C6KSX2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C6KSX2_F1_nD2

C6KSX2_F1_nD2

UID: 004027138

AlphaFold

Range: 166-400
AlphaFold: AF-C6KSX2
UniProt: C6KSX2 (all domains)
Gene: PF3D7_0612900

Protein: Nucleolar GTP-binding protein 1

3D Structure

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Related Domains

Browse other domains in MMR_HSR1, NOG1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1, NOG1(2004.1.1.453)

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

Nucleolar GTP-binding protein 1 (NOG1)

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C6KSX2 UniProt: C6KSX2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-400