ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

C6S3D8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C6S3D8_F1_nD3

C6S3D8_F1_nD3

UID: 004027246

AlphaFold

Range: 161-335
AlphaFold: AF-C6S3D8
UniProt: C6S3D8 (all domains)
Gene: PF3D7_1027600

Protein: DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: C6S3D8 UniProt: C6S3D8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 161-335