ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O96221_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O96221_F1_nD1

O96221_F1_nD1

UID: 004030254

AlphaFold

Range: 1-420,456-525,731-965
AlphaFold: AF-O96221
UniProt: O96221 (all domains)
Gene: PF3D7_0214100

Protein: Protein transport protein SEC31

3D Structure

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Related Domains

Browse other domains in Sec16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilySec16_C(109.21.1.3)

Pfam Families

PF12931TPR_Sec16

Sec16 Sec23-binding domain

ClanCL0020TPR

External Links

AlphaFold DB: O96221 UniProt: O96221

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-420,456-525,731-965