ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8IDB5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8IDB5_F1_nD1

Q8IDB5_F1_nD1

UID: 004030562

AlphaFold

Range: 6-80
AlphaFold: AF-Q8IDB5
UniProt: Q8IDB5 (all domains)
Gene: PF3D7_1359200

Protein: High mobility group protein B4, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in HMG_box_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box_2(190.1.1.3)

Pfam Families

PF09011HMG_box_2

HMG-box domain

ClanCL0114HMG-box

External Links

AlphaFold DB: Q8IDB5 UniProt: Q8IDB5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-80