ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q5M7C7_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5M7C7_nD1

Q5M7C7_nD1

UID: 004036277

AlphaFold

Range: 6-175
AlphaFold: AF-Q5M7C7
UniProt: Q5M7C7 (all domains)

3D Structure

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Related Domains

Browse other domains in Jagunal →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTetraspanin transmembrane domain(174)

HH-groupTetraspanin transmembrane domain(174.1)

TT-groupTetraspanin transmembrane domain(174.1.1)

FFamilyJagunal(174.1.1.2)

Pfam Families

PF07086Jagunal

Jagunal, ER re-organisation during oogenesis

External Links

AlphaFold DB: Q5M7C7 UniProt: Q5M7C7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-175