ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q87F55_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q87F55_nD2

Q87F55_nD2

UID: 004041751

AlphaFold

Range: 101-170
AlphaFold: AF-Q87F55
UniProt: Q87F55 (all domains)
Gene: rimM

Protein: Ribosome maturation factor RimM

3D Structure

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Related Domains

Browse other domains in PRC_RimM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupPRC-barrel domain(4.6)

TT-groupPRC-barrel domain(4.6.1)

FFamilyPRC_RimM(4.6.1.6)

Pfam Families

PF24986PRC_RimM

RimM PRC barrel domain

ClanCL0350PRC-barrel

External Links

AlphaFold DB: Q87F55 UniProt: Q87F55

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-170