ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3od5B1 - ECOD Domain | ECOD

ECOD/Domains/e3od5B1

e3od5B1

UID: 000404222

PDB

Range: B:31-291
PDB: 3OD5 chain B(all domains)
UniProt: P55212 (all domains)
Gene: CASP6

Molecule: Caspase-6

3D Structure

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Related Domains

Browse other domains in Peptidase_C14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C14(7575.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00656Peptidase_C14

Caspase domain

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 3OD5 RCSB PDB: 3OD5 PDBe: 3OD5 UniProt: P55212

Downloads

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