ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0DG80_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0DG80_nD1

P0DG80_nD1

UID: 004044955

AlphaFold

Range: 6-110
AlphaFold: AF-P0DG80
UniProt: P0DG80 (all domains)
Gene: SpyM3_0842

Protein: UPF0122 protein SpyM3_0842

3D Structure

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Related Domains

Browse other domains in UPF0122 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyUPF0122(101.1.1.26)

Pfam Families

PF04297UPF0122

Putative helix-turn-helix protein, YlxM / p13 like

ClanCL0123HTH

External Links

AlphaFold DB: P0DG80 UniProt: P0DG80

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-110