ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5F3R2_nD9 - ECOD Domain | ECOD

ECOD/Domains/Q5F3R2_nD9

Q5F3R2_nD9

UID: 004056277

AlphaFold

Range: 1136-1200
AlphaFold: AF-Q5F3R2
UniProt: Q5F3R2 (all domains)
Gene: KDM5B

Protein: Lysine-specific demethylase 5B (EC 1.14.11.67) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) ([histone H3]-trimethyl-L-lysine(4) demethylase 5B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q5F3R2 UniProt: Q5F3R2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1136-1200