ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q3IKB8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q3IKB8_nD2

Q3IKB8_nD2

UID: 004057794

AlphaFold

Range: 316-405
AlphaFold: AF-Q3IKB8
UniProt: Q3IKB8 (all domains)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_OB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_OB(2.1.1.26)

Pfam Families

PF03120OB_DNA_ligase

NAD-dependent DNA ligase OB-fold domain

ClanCL0021OB

External Links

AlphaFold DB: Q3IKB8 UniProt: Q3IKB8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-405