ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6GHJ5_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6GHJ5_nD1

Q6GHJ5_nD1

UID: 004070356

AlphaFold

Range: 1-240
AlphaFold: AF-Q6GHJ5
UniProt: Q6GHJ5 (all domains)
Gene: trmD

Protein: tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)

3D Structure

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Related Domains

Browse other domains in tRNA_m1G_MT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilytRNA_m1G_MT(2488.1.1.3)

Pfam Families

PF01746tRNA_m1G_MT

tRNA (Guanine-1)-methyltransferase TrmD

ClanCL0098SPOUT

External Links

AlphaFold DB: Q6GHJ5 UniProt: Q6GHJ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-240