ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A6VFM8_nD2 - ECOD Domain | ECOD

ECOD/Domains/A6VFM8_nD2

A6VFM8_nD2

UID: 004071561

AlphaFold

Range: 6-45,126-245
AlphaFold: AF-A6VFM8
UniProt: A6VFM8 (all domains)
Gene: cofE

Protein: Coenzyme F420:L-glutamate ligase (EC 6.3.2.31) (EC 6.3.2.34) (Coenzyme F420-0:L-glutamate ligase) (Coenzyme F420-1:gamma-L-glutamate ligase)

3D Structure

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Related Domains

Browse other domains in F420_ligase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCofE-like(4093)

HH-groupCofE-like(4093.1)

TT-groupCofE-like(4093.1.1)

FFamilyF420_ligase(4093.1.1.1)

Pfam Families

PF01996F420_ligase

F420-0:Gamma-glutamyl ligase

External Links

AlphaFold DB: A6VFM8 UniProt: A6VFM8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-45,126-245