ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9NJN5_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9NJN5_nD1

Q9NJN5_nD1

UID: 004071970

AlphaFold

Range: 1-130,296-410
AlphaFold: AF-Q9NJN5
UniProt: Q9NJN5 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_3(4010.1.1.3)

Pfam Families

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

AlphaFold DB: Q9NJN5 UniProt: Q9NJN5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-130,296-410