ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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D5AQI9_nD1 - ECOD Domain | ECOD

ECOD/Domains/D5AQI9_nD1

D5AQI9_nD1

UID: 004073251

AlphaFold

Range: 26-110
AlphaFold: AF-D5AQI9
UniProt: D5AQI9 (all domains)

3D Structure

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Related Domains

Browse other domains in Sigma70_r1_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRNA polymerase sigma factor rpoD N-terminal domain(3498)

HH-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1)

TT-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1.1)

FFamilySigma70_r1_1(3498.1.1.2)

Pfam Families

PF03979Sigma70_r1_1

Sigma-70 factor, region 1.1

External Links

AlphaFold DB: D5AQI9 UniProt: D5AQI9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-110