ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q56JA9_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q56JA9_nD1

Q56JA9_nD1

UID: 004075482

AlphaFold

Range: 1-280
AlphaFold: AF-Q56JA9
UniProt: Q56JA9 (all domains)

3D Structure

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Related Domains

Browse other domains in GDPD_2, SPH →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGDPD_2, SPH(2002.1.1.269)

Pfam Families

Glycerophosphoryl diester phosphodiesterase family

ClanCL0036TIM_barrel

Dermonecrotic toxin SPH

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q56JA9 UniProt: Q56JA9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-280