ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3limF1 - ECOD Domain | ECOD

ECOD/Domains/e3limF1

e3limF1

UID: 000407956

PDB

Range: F:2-179
PDB: 3LIM chain F(all domains)
UniProt: B9W5G6 (all domains)

Molecule: Fragaceatoxin C

3D Structure

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Related Domains

Browse other domains in Anemone_cytotox →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupOsmotin-like(11.8)

TT-groupOsmotin-like(11.8.1)

FFamilyAnemone_cytotox(11.8.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Dodecyldimethylamine N-oxide)

Dodecyldimethylamine N-oxideLDA
DrugBank DB04147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06369Anemone_cytotox

Sea anemone cytotoxic protein

ClanCL0872PfC-like

External Links

ECOD PDB View: 3LIM RCSB PDB: 3LIM PDBe: 3LIM UniProt: B9W5G6

Downloads

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