ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q9F5K6_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9F5K6_nD2

Q9F5K6_nD2

UID: 004079788

AlphaFold

Range: 116-285
UniProt: Q9F5K6 (all domains)
Gene: aviRb

Protein: 23S rRNA (uridine(2479)-2'-O)-methyltransferase (EC 2.1.1.208) (Avilamycin resistance protein B)

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

UniProt: Q9F5K6

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