ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A2RNN6_nD1 - ECOD Domain | ECOD

ECOD/Domains/A2RNN6_nD1

A2RNN6_nD1

UID: 004080027

AlphaFold

Range: 11-80
AlphaFold: AF-A2RNN6
UniProt: A2RNN6 (all domains)
Gene: rpsE

Protein: Small ribosomal subunit protein uS5 (30S ribosomal protein S5)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: A2RNN6 UniProt: A2RNN6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-80