ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5HFD2_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5HFD2_nD1

Q5HFD2_nD1

UID: 004086137

AlphaFold

Range: 6-325
AlphaFold: AF-Q5HFD2
UniProt: Q5HFD2 (all domains)
Gene: hisS

Protein: Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_His →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_His(314.1.1.9)

Pfam Families

PF13393tRNA-synt_His

Histidyl-tRNA synthetase

ClanCL0040tRNA_synt_II

External Links

AlphaFold DB: Q5HFD2 UniProt: Q5HFD2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-325