ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ot2A2 - ECOD Domain | ECOD

ECOD/Domains/e1ot2A2

e1ot2A2

UID: 000040915

PDB

Range: A:582-686
PDB: 1OT2 chain A(all domains)
UniProt: P43379 (all domains)
Gene: cgt

Molecule: Cyclomaltodextrin glucanotransferase

3D Structure

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Related Domains

Browse other domains in CBM_20 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyCBM_20(11.1.4.3)

Ligands

in contact, ≤ 4 Å

alpha-D-glucopyranoseGLC
within 5 Å only

+ 2 additives (HEPES, (4S)-2-METHYL-2,4-PENTANEDIOL)

HEPESEPE
DrugBank DB16872within 5 Å only

Pfam Families

Starch binding domain

ClanCL0369GHD

External Links

ECOD PDB View: 1OT2 RCSB PDB: 1OT2 PDBe: 1OT2 UniProt: P43379

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4S)-2-METHYL-2,4-PENTANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.