ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P39890_nD1 - ECOD Domain | ECOD

ECOD/Domains/P39890_nD1

P39890_nD1

UID: 004098715

AlphaFold

Range: 1-109
AlphaFold: AF-P39890
UniProt: P39890 (all domains)
Gene: tcmI

Protein: Tetracenomycin F2 cyclase (EC 4.2.1.154) (Tetracenomycin polyketide synthesis protein TcmI)

3D Structure

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Related Domains

Browse other domains in Cyclase_polyket →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyCyclase_polyket(304.4.1.7)

Pfam Families

PF04673Cyclase_polyket

Polyketide synthesis cyclase

ClanCL0032Dim_A_B_barrel

External Links

AlphaFold DB: P39890 UniProt: P39890

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-109