ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0C0J8_nD2 - ECOD Domain | ECOD

ECOD/Domains/P0C0J8_nD2

P0C0J8_nD2

UID: 004104053

AlphaFold

Range: 156-340,401-415
AlphaFold: AF-P0C0J8
UniProt: P0C0J8 (all domains)
Gene: p46

Protein: 46 kDa surface antigen (p46)

3D Structure

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Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

AlphaFold DB: P0C0J8 UniProt: P0C0J8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-340,401-415