ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5HGF6_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5HGF6_nD3

Q5HGF6_nD3

UID: 004106568

AlphaFold

Range: 456-555
AlphaFold: AF-Q5HGF6
UniProt: Q5HGF6 (all domains)
Gene: rnj2

Protein: Ribonuclease J 2 (RNase J2) (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in RNase_J_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupFlagellar protein FlgA N-terminal domain-like(3068)

HH-groupRNase J C-terminal domain(3068.2)

TT-groupRNase J C-terminal domain(3068.2.1)

FFamilyRNase_J_C(3068.2.1.1)

Pfam Families

PF17770RNase_J_C

Ribonuclease J C-terminal domain

External Links

AlphaFold DB: Q5HGF6 UniProt: Q5HGF6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 456-555