ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U2UMQ6_nD1 - ECOD Domain | ECOD

ECOD/Domains/U2UMQ6_nD1

U2UMQ6_nD1

UID: 004109558

AlphaFold

Range: 51-315
AlphaFold: AF-U2UMQ6
UniProt: U2UMQ6 (all domains)
Gene: cas12a

Protein: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (AsCpf1) (CRISPR-associated endonuclease Cpf1)

3D Structure

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Related Domains

Browse other domains in REC1 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease first helical domain(1070)

HH-groupCRISPR-associated endonuclease Cpf1 first helical domain(1070.1)

TT-groupCRISPR-associated endonuclease Cpf1 first helical domain(1070.1.1)

FFamilyREC1(1070.1.1.1)

Pfam Families

Alpha helical recognition lobe domain

External Links

AlphaFold DB: U2UMQ6 UniProt: U2UMQ6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-315