ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4FUB7_nD3 - ECOD Domain | ECOD

ECOD/Domains/A4FUB7_nD3

A4FUB7_nD3

UID: 004110357

AlphaFold

Range: 101-310
AlphaFold: AF-A4FUB7
UniProt: A4FUB7 (all domains)
Gene: GIN1

Protein: Gypsy retrotransposon integrase-like protein 1 (GIN-1)

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A4FUB7 UniProt: A4FUB7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-310