ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P0A0B0_nD3 - ECOD Domain | ECOD

ECOD/Domains/P0A0B0_nD3

P0A0B0_nD3

UID: 004111959

AlphaFold

Range: 386-485
AlphaFold: AF-P0A0B0
UniProt: P0A0B0 (all domains)
Gene: mecR1

Protein: Methicillin resistance mecR1 protein

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

AlphaFold DB: P0A0B0 UniProt: P0A0B0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 386-485